Package: leiden 0.4.3.1

leiden: R Implementation of Leiden Clustering Algorithm

Implements the 'Python leidenalg' module to be called in R. Enables clustering using the leiden algorithm for partition a graph into communities. See the 'Python' repository for more details: <https://github.com/vtraag/leidenalg> Traag et al (2018) From Louvain to Leiden: guaranteeing well-connected communities. <arxiv:1810.08473>.

Authors:S. Thomas Kelly [aut, cre, trl], Vincent A. Traag [com]

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leiden/json (API)
NEWS

# Install 'leiden' in R:
install.packages('leiden', repos = c('https://tomkellygenetics.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/tomkellygenetics/leiden/issues

On CRAN:

1 exports 36 stars 5.90 score 20 dependencies 67 dependents 142 scripts 21.3k downloads

Last updated 4 months agofrom:22ae49d7bb. Checks:OK: 7. Indexed: yes.

TargetResultDate
Doc / VignettesOKAug 25 2024
R-4.5-winOKAug 25 2024
R-4.5-linuxOKAug 25 2024
R-4.4-winOKAug 25 2024
R-4.4-macOKAug 25 2024
R-4.3-winOKAug 25 2024
R-4.3-macOKAug 25 2024

Exports:leiden

Dependencies:clicpp11gluehereigraphjsonlitelatticelifecyclemagrittrMatrixpkgconfigpngrappdirsRcppRcppTOMLreticulaterlangrprojrootvctrswithr

Benchmarking the Leiden algorithm with R and Python

S. Thomas Kelly

Rendered frombenchmarking.Rmdusingknitr::knitron Aug 25 2024.

Last update: 2023-11-08
Started: 2019-07-13

Running the Leiden algorithm with R on adjacency matrices

S. Thomas Kelly

Rendered fromrun_leiden.Rmdusingknitr::knitron Aug 25 2024.

Last update: 2022-09-12
Started: 2019-01-25

Running the Leiden algorithm with R on bipartite graphs

S. Thomas Kelly

Rendered fromrun_bipartite.Rmdusingknitr::knitron Aug 25 2024.

Last update: 2021-01-26
Started: 2020-10-28

Running the Leiden algorithm with R on Graph Objects

S. Thomas Kelly

Rendered fromrun_igraph.Rmdusingknitr::knitron Aug 25 2024.

Last update: 2021-07-27
Started: 2019-07-13

Running the Leiden algorithm with R on multiplex graphs

S. Thomas Kelly

Rendered fromrun_multiplex.Rmdusingknitr::knitron Aug 25 2024.

Last update: 2023-11-08
Started: 2020-12-06